PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08981
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family BES1
Protein Properties Length: 309aa    MW: 33657 Da    PI: 4.5028
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08981genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82266.59.8e-2119847134
    DUF822  47 nneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasa.......a 134
               +n+Vl+AL+r+AGw+v++DGtt+  +  p+  + a+  g+++ +s e+++  +sl+s+a+ +p++s+++ +++++++spsslds+ +a++        
  EMT08981   1 MNDVLAALARAAGWTVHPDGTTFLSSPPPPlpSPAQFQGAFQATSLETPVFtNSLNSYAIGTPLDSQASALQTDDSLSPSSLDSVVVAEQsiknesyG 98 
               7***********************998888999999***************99**********************************98854433331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.6E-201108IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.82E-49157304IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.5E-54159304IPR013781Glycoside hydrolase, catalytic domain
PfamPF013737.1E-23182300IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-11197211IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-11218236IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.7E-11240261IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MNDVLAALAR AAGWTVHPDG TTFLSSPPPP LPSPAQFQGA FQATSLETPV FTNSLNSYAI  60
GTPLDSQASA LQTDDSLSPS SLDSVVVAEQ SIKNESYGNS SSANSLNCMG SDQPNFSFGL  120
SDLANQIGIK LGDNLSFSFI VQLEQLLRAS AVCAGDFTKT PYIPVYASLS MGIINCYCQL  180
VDPEAVRAEL RHLKSLNVDG VVVDCWWGIV EAWTPQKYEW SGYRDLFGII KEFKLKVQVV  240
LSFHGSGECG SGGVLIALPR WVLEIAQENQ DIFFTDREGR RNTECLSWGI DKERVLRGRT  300
GIEVLGHPW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1fa2_A1e-3916230412154BETA-AMYLASE
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFN1793991e-137FN179399.1 Hordeum vulgare subsp. vulgare partial mRNA for beta-amylase (BAM7 gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014755446.11e-154PREDICTED: beta-amylase 8 isoform X1
TrEMBLM8B4R10.0M8B4R1_AEGTA; Beta-amylase
STRINGMLOC_19022.81e-164(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21413663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.23e-82beta-amylase 2